BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025B04SP1|AL428330
(893 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1804 1770 0.0
3x_Contig4 151 3e-36
>3x_Contig1804
Length = 51183
Score = 1770 bits (893), Expect = 0.0
Identities = 893/893 (100%)
Strand = Plus / Minus
Query: 1 gatccaagaccctgcttttaatgttataatctgcctagatatttatatatttaaactgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23431 gatccaagaccctgcttttaatgttataatctgcctagatatttatatatttaaactgta 23372
Query: 61 gttttctcatttatcaaataatagtaatgtagatgcattttagatgcacatatgagttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23371 gttttctcatttatcaaataatagtaatgtagatgcattttagatgcacatatgagttga 23312
Query: 121 taggtttttgtttcaaaacatgtgatgtgaaaaggggacaatcagggtatcagttggtgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23311 taggtttttgtttcaaaacatgtgatgtgaaaaggggacaatcagggtatcagttggtgg 23252
Query: 181 catccaactcaccatgattattaggagtcaacaatatcttgatgtttttctctttatggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23251 catccaactcaccatgattattaggagtcaacaatatcttgatgtttttctctttatggt 23192
Query: 241 tcattaattcgtcgaaccctttagtgaacccatcttcgattttttgtctacccgtaatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23191 tcattaattcgtcgaaccctttagtgaacccatcttcgattttttgtctacccgtaatca 23132
Query: 301 aatgtctagctttatcaatagcaatgctgccattgcctaaggcttggaccacatcttcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23131 aatgtctagctttatcaatagcaatgctgccattgcctaaggcttggaccacatcttcaa 23072
Query: 361 aatctttaatggtgtaacacatggaaccggtgacgaatttctcttgcagagtgacgtcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23071 aatctttaatggtgtaacacatggaaccggtgacgaatttctcttgcagagtgacgtcca 23012
Query: 421 taggtttgaaatcgatgggtttgtggccccagattgcaatattaacatacatacctctga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23011 taggtttgaaatcgatgggtttgtggccccagattgcaatattaacatacatacctctga 22952
Query: 481 aggtagtagcatggacacctgtatcaaaagttggtttaacaccagaacaatcgtaggcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22951 aggtagtagcatggacacctgtatcaaaagttggtttaacaccagaacaatcgtaggcaa 22892
Query: 541 aatcgaaaccttcaccacctggagccaatttcttcaaaatattaacggcatcttctttat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22891 aatcgaaaccttcaccacctggagccaatttcttcaaaatattaacggcatcttctttat 22832
Query: 601 gttcagaaggatcgaaggtttcgacaccaagcttggcagcttgatttcttctgatttcag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22831 gttcagaaggatcgaaggtttcgacaccaagcttggcagcttgatttcttctgatttcag 22772
Query: 661 ctggttcagagactacaatcttggaggcaccatgaccttgcaaagctaaaatggtggcta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22771 ctggttcagagactacaatcttggaggcaccatgaccttgcaaagctaaaatggtggcta 22712
Query: 721 atccaattggacctgcgccaagaactaaggcggattggcccttctgtaacttggagattc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22711 atccaattggacctgcgccaagaactaaggcggattggcccttctgtaacttggagattc 22652
Query: 781 taacagcatgccatgagacggagattggttcgactaaggctgcaacgtccaatggtaaag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22651 taacagcatgccatgagacggagattggttcgactaaggctgcaacgtccaatggtaaag 22592
Query: 841 tgtttggaatcttaacaacgtgcttttcactaacaacgactttttcagcaaaa 893
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22591 tgtttggaatcttaacaacgtgcttttcactaacaacgactttttcagcaaaa 22539
>3x_Contig4
Length = 583
Score = 151 bits (76), Expect = 3e-36
Identities = 85/88 (96%)
Strand = Plus / Plus
Query: 1 gatccaagaccctgcttttaatgttataatctgcctagatatttatatatttaaactgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 233 gatccaagaccctgcttttaatgttataatctgcctagatatttatatatttaccctgta 292
Query: 61 gttttctcatttatcaaataatagtaat 88
||||||||||||||||||||||| ||||
Sbjct: 293 gttttctcatttatcaaataatattaat 320
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7219
Number of Sequences: 1807
Number of extensions: 7219
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 2
length of query: 893
length of database: 10,358,551
effective HSP length: 16
effective length of query: 877
effective length of database: 10,329,639
effective search space: 9059093403
effective search space used: 9059093403
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)